| Swift Slough | Des Moines, IA | 63.4 miles | SW |
| The Narrows | Fulton, IL | 63.5 miles | SE |
| Jordan Chute | Henderson, IL | 67.6 miles | SW |
| The Reach | Jo Daviess, IL | 72 miles | NW |
| Lower Cutoff | Henderson, IL | 73.1 miles | SW |
| Lake Peosta Channel | Dubuque, IA | 84.1 miles | NW |
| Aurora Chain of Lakes | Kane, IL | 88 miles | NE |
| Jericho Lake Diversion | Kane, IL | 88.2 miles | NE |
| Aurora Chain of Lakes Cherry Hills Diversion | Kane, IL | 88.3 miles | NE |
| Lake Run North Of I-88 Overflow | Kane, IL | 88.8 miles | NE |
| Lake Run South of I-88 Diversion | Kane, IL | 88.8 miles | NE |
| Lake Run North of I-88 Overflow East Branch | Kane, IL | 89.1 miles | NE |
| Potosi Canal | Grant, WI | 94.6 miles | NW |
| Cassville Iowa Slough | Clayton, IA | 107.1 miles | NW |
| Cassville Slough | Clayton, IA | 109.2 miles | NW |
| Ackerman Cut | Clayton, IA | 109.6 miles | NW |
| Ferry Slough | Clayton, IA | 111.9 miles | NW |
| Canton Chute | Adams, IL | 118.8 miles | SW |
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